Package index • dicomtk

Core DICOM I/O

Read and write DICOM headers, pixel matrices, and 3D multi-slice series.

Inspect, modify, and query the 5,354-tag DCMTK 3.7.1 data dictionary.

dicom_tags dicom_tags(): Standard DICOM Data Dictionary (DCMTK 3.7.1 / PS 3.6-2026d)
dicom_tag_value(): Quickly Extract Specific Tag Values from a DICOM File
dicom_modify(): Modify, Insert, or Delete DICOM Header Tags
dicom_tag_lookup(): Search or Query the DICOM Data Dictionary
date_tags: DICOM Date Tags
datetime_tags: DICOM DateTime Tags
removal_tags: HIPAA / DICOM De-identification Removal Tags

HIPAA Safe Harbor and DICOM PS3.15 confidentiality profile anonymization.

dicom_anonymize(): De-identify / Anonymize a DICOM File (HIPAA & DICOM PS3.15 Profile)

Clinical windowing, ggplot2 rendering, interactive Shiny viewer, and 3D MPR/MIP/rgl.

dicom_window(): Apply VOI LUT Window/Level Transformation to DICOM Pixels
plot_dicom(): Plot a DICOM Image Using ggplot2
ggdicom(): Create a ggplot2 DICOM Image Object
dicom_viewer(): Launch Interactive Shiny DICOM Viewer
render_volume(): Render a 3D DICOM Volume (Orthogonal MPR, MIP, or Interactive rgl 3D)

Convert between DICOM, PNG, NIfTI, XML, JSON, PDF, and RLE compression.

DIMSE C-ECHO, C-FIND, C-GET, C-STORE, local index DB, worklists, and TLS.

dicom_connect(): Create a DICOM PACS Network Connection Specification
dicom_echo(): Verify DICOM PACS Connectivity (C-ECHO SCU)
dicom_find(): Query DICOM Studies, Series, or Instances (C-FIND / QIDO-RS / Local PACS)
dicom_get(): Retrieve DICOM Files from PACS Connection (C-GET / C-MOVE / Local PACS)
dicom_send(): Send DICOM Files to a PACS Peer (C-STORE SCU)
dicom_receive(): Configure a Local DICOM Storage Receiver Directory (C-STORE SCP)
dicom_qrdb_index(): Build or Query a Local DICOM Query/Retrieve Index Database (dcmqrdb)
dicom_worklist(): Query or Create Modality Worklist Entries (dcmwlm)
dicom_tls_config(): Configure DICOM TLS Transport Security Parameters (dcmtls)

Interfaces for dcmsr, dcmrt, dcmseg, dcmpmap, dcmtract, dcmect, dcmpstat, and dcmsign.

read_dicom_sr(): Read a DICOM Structured Report (SR) or Advanced IOD
create_dicom_sr(): Create a DICOM Basic Text Structured Report (SR)
read_dicom_rt(): Read Radiation Therapy (RT) DICOM Objects (dcmrt)
read_dicom_seg(): Read DICOM Segmentation Objects (dcmseg)
read_dicom_pmap(): Read DICOM Parametric Map Objects (dcmpmap)
read_dicom_tract(): Read DICOM Tractography Results (dcmtract)
read_dicom_pstate(): Read DICOM Grayscale Softcopy Presentation State (dcmpstat)
read_dicom_ect(): Read DICOM Tractography Results (dcmtract) and Enhanced Multi-Frame IODs (dcmect / dcmfg)
dicom_verify_signature(): Inspect Digital Signatures in a DICOM File (dcmsign)

Connect DICOM studies and images to local Ollama and cloud OpenAI/Anthropic models.

Backward-compatible wrappers for original dcmtk R package functions.

dcmdump() dcmdump_full() dcmhd() wide_hdr() burned_annot() dcmodify() dcm_anon() dcm_subtract_date() dcmj2pnm() dcmdjpeg() dcmdrle() dcmcrle() check_dcmtk_cmd(): Legacy Compatibility Functions from dcmtk